Gardnerella diversity by metagenomic sequencing in the vaginal microb... - SRA

SRX23901747: Gardnerella diversity by metagenomic sequencing in the vaginal microbiome
1 ILLUMINA (Illumina HiSeq 4000) run: 5.8M spots, 860M bases, 329.7Mb downloads

Design: Metagenomic sequencing of the vaginal microbiome during pregnancy in subjects enriched for Gardnerella vaginalis. Human sequences removed.

Submitted by: NC State University

Study: Gardnerella diversity by metagenomic sequencing in the vaginal microbiome

PRJNA1086504 • SRP494583 • All experiments • All runs

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Metagenomic sequencing of the vaginal microbiome collected from subjects during pregnancy. Initially used to study the diversity and ecology of Gardnerella in the vaginal microbiome in pregnancy and preterm birth. Human sequences have been removed by filtering against the human genome GRCh38.p13 with Bbmap.

Sample: Metagenomic sequencing of the vaginal microbiome during pregnancy. Human sequences removed

SAMN40379087 • SRS20725101 • All experiments • All runs

Organism: human vaginal metagenome

Library:

Name: 4007435168

Instrument: Illumina HiSeq 4000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 5.8M spots, 860M bases, 329.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR28292457	5,761,738	860M	329.7Mb	2024-03-13

ID:: 32206535

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